genepattern (Broad Institute Inc)
90
Structured Review
Broad Institute Inc
genepattern
Genepattern, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/genepattern/genepattern/pmc12280343-37-0-2
Average 90 stars, based on 1 article reviews
Genepattern, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/genepattern/genepattern/pmc12280343-37-0-2
Average 90 stars, based on 1 article reviews
genepattern - by Bioz Stars,
2026-09
90/100 stars
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Expressing:Article Title: PU.1 eviction at lymphocyte-specific chromatin domains mediates glucocorticoid response in acute lymphoblastic leukemia. Article Snippet: Heatmaps of gene expression profiles and epigenetic profiles at related regulatory regions were generated using Genepattern (Broad Institute, USA). Article Title: TRIM29 upregulation contributes to chemoresistance in triple negative breast cancer via modulating S100P-β-catenin axis. Article Snippet: Correlation analysis: Single sample gene set enrichment analysis (ssGSEA) was performed on Genepattern (Broad Institute web-based tool) [49]. Article Title: Macrophage-Kruppel-Like Factor 6 Signaling Promotes Experimental Atherogenesis. Article Snippet: Gene expression tables for relevant pairwise comparisons were analyzed for Gene Set Enrichment Analysis19 using GenePattern (Broad Institute, Cambridge, MA; version v3.9.11rc.5 b234). Article Title: Macrophage fatty acid metabolism under chronic hypoxia shapes γδ T cell recruitment via CCL22 Article Snippet: Article Title: Comprehensive analysis of transcription factor-based molecular subtypes and their correlation to clinical outcomes in small-cell lung cancer Article Snippet: Gene set enrichment analysis (GSEA) for MSigDB Hallmark pathways was performed using the R package fgsea. the web-based module (GenePattern, Broad Institute). Article Title: TRPS1: a highly sensitive and specific marker for breast carcinoma, especially for triple-negative breast cancer Article Snippet: Molecular subtypes of breast cancers were determined using consensus Kmeans clustering of top 5000 variedly expressed genes using GenePattern from the Broad Institute ( https://www.genepattern.org/ ). Article Title: TRIM29 upregulation contributes to chemoresistance in triple negative breast cancer via modulating S100P-β-catenin axis Article Snippet: Correlation analysis : Single sample gene set enrichment analysis (ssGSEA) was performed on Genepattern (Broad Institute web-based tool) [ ]. Generated:Article Title: PU.1 eviction at lymphocyte-specific chromatin domains mediates glucocorticoid response in acute lymphoblastic leukemia. Article Snippet: Heatmaps of gene expression profiles and epigenetic profiles at related regulatory regions were generated using Genepattern (Broad Institute, USA). Article Title: TRIM29 upregulation contributes to chemoresistance in triple negative breast cancer via modulating S100P-β-catenin axis. Article Snippet: Correlation analysis: Single sample gene set enrichment analysis (ssGSEA) was performed on Genepattern (Broad Institute web-based tool) [49]. Article Title: Macrophage-Kruppel-Like Factor 6 Signaling Promotes Experimental Atherogenesis. Article Snippet: Gene expression tables for relevant pairwise comparisons were analyzed for Gene Set Enrichment Analysis19 using GenePattern (Broad Institute, Cambridge, MA; version v3.9.11rc.5 b234). Article Title: Macrophage fatty acid metabolism under chronic hypoxia shapes γδ T cell recruitment via CCL22 Article Snippet: Article Title: Comprehensive analysis of transcription factor-based molecular subtypes and their correlation to clinical outcomes in small-cell lung cancer Article Snippet: Gene set enrichment analysis (GSEA) for MSigDB Hallmark pathways was performed using the R package fgsea. the web-based module (GenePattern, Broad Institute). Article Title: TRPS1: a highly sensitive and specific marker for breast carcinoma, especially for triple-negative breast cancer Article Snippet: Molecular subtypes of breast cancers were determined using consensus Kmeans clustering of top 5000 variedly expressed genes using GenePattern from the Broad Institute ( https://www.genepattern.org/ ). Article Title: TRIM29 upregulation contributes to chemoresistance in triple negative breast cancer via modulating S100P-β-catenin axis Article Snippet: Correlation analysis : Single sample gene set enrichment analysis (ssGSEA) was performed on Genepattern (Broad Institute web-based tool) [ ]. |